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PST05106 Pharmaceutical Organic Chemistry

Pharmaceutical Sciences Notes, PST Level 5 Semester 1, PST NTA Level 5, PST05106 Pharmaceutical Organic Chemistry

Acyl Chlorides of Pharmaceutical Importance – PST05106 Pharmaceutical Organic Chemistry

NTA Level 5 • Semester 1 • PST05106 Acyl Chlorides of Pharmaceutical Importance Pharmaceutical Organic Chemistry • Source Session/Topic 14 Full source-text version: all educational wording from the extracted learning source is retained; only presenter/tutor metadata and web-layout noise are removed, while formatting is improved for readability. Session 14: Acyl Chlorides of Pharmaceutical Importance. Total Session Time: 120 minutes Prerequisites • None Learning Tasks By the end of this session students are expected to be able to: • Define acyl chlorides • Explain nomenclature of acyl chlorides • Explain physical properties of acyl chlorides • Describe the preparation of acyl chlorides • Explain chemical reactions of acyl chlorides Resources Needed: • Flip charts, marker pens, and masking tape • Black/white board and chalk/whiteboard markers SESSION OVERVIEW |Step |Time |Activity/ |Content | | | |Method | | |1 |05 minutes |Presentation |Introduction, Learning Tasks | |2 |10 minutes |Brainstorming |Definition of acyl chlorides | | | |Presentation | | |3 |15 minutes |Presentation |Nomenclature of acyl chlorides | |4 |15 minutes |Presentation |Physical Properties of Acyl | | | | |Chlorides | |5 |20 minutes |Buzzing |Preparation of Acyl Chlorides | | | |Presentation | | |6 |40 minutes |Group |Chemical Reactions involving acyl | | | |discussion |chlorides | | | |Presentation | | |7 |05 minutes |Presentation |Key Points | |8 |10 minutes |Presentation |Evaluation | SESSION CONTENTS STEP 1: Presentation of Session Title and Learning Tasks (5 minutes). READ or ASK students to read the learning tasks and clarify. ASK students if they have any questions before continuing. STEP 2: Definition of Acyl Chlorides (10 minutes). |Activity: Brainstorming (5 minutes) | | | |Ask students to brainstorm on the following question: | |What are acyl chlorides? | | | |ALLOW few students to respond. | | | |WRITE their responses on the flip chart/ board. | | | |CLARIFY and SUMMARISE by using the content below | • Acyl chlorides as "acid derivatives". • A carboxylic acid such as ethanoic acid has the structure: [pic] • There are a number of related compounds in which the -OH group in the acid is replaced by something else. • Compounds like this are described as acid derivatives. • Acyl chlorides (also known as acid chlorides) are one example of an acid derivative. • In this case, the -OH group has been replaced by a chlorine atom. [pic] STEP 3: Nomenclature of Acyl Chlorides (15 minutes). • The easiest way of thinking about the names is to see the relationship with the corresponding. |carboxylic acid |acyl chloride |acyl chloride | |name |name |formula | |ethanoic acid |ethanoyl |CH3COCl | | |chloride | | |propanoic acid |propanoyl |CH3CH2COCl | | |chloride | | |butanoic acid |butanoyl |CH3CH2CH2COCl | | |chloride | | • The acyl group name is derived from the carboxylic acid name by replacing -oic acid by -ly. • If you have something substituted into the hydrocarbon chain, the carbon in the -COCl group counts as the number 1 carbon. • For example, 2-methylbutanoyl chloride is: [pic] • Note: Hardly anyone ever mentions methanoyl chloride, HCOCl – derived from methanoic acid. • That is because methanoyl chloride is very unstable, decomposing to give carbon monoxide and HCl. STEP 4: Physical properties of acyl chlorides (15 minutes). • Appearance o An acyl chloride like ethanoyl chloride is a colourless fuming liquid. o The strong smell of ethanoyl chloride is a mixture of the smell of vinegar (ethanoic acid) and the acrid smell of hydrogen chloride gas. o The smell and the fumes are because ethanoyl chloride reacts with water vapour in the air. • Solubility in water o Acyl chlorides can't be said to dissolve in water because they react (often violently) with it. o The strong reaction means that it is impossible to get a simple aqueous solution of an acyl chloride. • Boiling points o Taking ethanoyl chloride as typical: o Ethanoyl chloride boils at 51°C. o It is a polar molecule, and so has dipole-dipole attractions between its molecules as well as van der Waals dispersion forces. o However, it doesn't form hydrogen bonds. o Its boiling point is therefore higher than, say, an alkane of similar size (which has no permanent dipoles), but not as high as a similarly sized alcohol (which forms hydrogen bonds in addition to everything else.) STEP 5: Preparation of Acyl Chlorides (20 minutes). |Activity: Buzzing (5minutes) | | | |ASK students to pair up and buzz on the following question for 5 | |minutes. | |How are acyl chlorides prepared? | | | |ALLOW pairs to respond on the question. | | | |WRITE their response on the flip chart/board. | | | |CLARIFY and SUMMARIZE by using the content in the table 1 below | • Acyl chlorides are prepared by treatment of carboxylic acids with thionyl (SOCl2). [pic] • Example, [pic] STEP 6: Chemical Reactions involving acyl chlorides (40 minutes). |Activity: Small Group Discussion (15 minutes) | | | |DIVIDE students into small groups | | | |ASK students to discuss in groups on the following questions | |What are the chemical reactions involving Esters? | |[pic]REFER Students to Book | |ALLOW students to discuss for 10 minutes | | | |ALLOW each group to present for 5 minutes | | | |CLARIFY and SUMMARIZE by using the contents below | • Substitution of the chlorine atom by other groups o Acyl chlorides are extremely reactive, and in their reactions the chlorine atom is replaced by other groups. o In each case, in the first instance, hydrogen chloride gas is produced as steamy acidic fumes. o However, in some cases the hydrogen chloride goes on to react with one of the substances in the reaction mixture. o Taking ethanoyl chloride as typical, the initial reaction is of this kind: [pic][pic] o The reactions involve compounds like water, alcohols and phenols, or ammonia and amines. o All of these particular cases contain a very electronegative element with an active lone

Pharmaceutical Sciences Notes, PST Level 5 Semester 1, PST NTA Level 5, PST05106 Pharmaceutical Organic Chemistry

Esters of Pharmaceutical Importance – PST05106 Pharmaceutical Organic Chemistry

NTA Level 5 • Semester 1 • PST05106 Esters of Pharmaceutical Importance Pharmaceutical Organic Chemistry • Source Session/Topic 13 Full source-text version: all educational wording from the extracted learning source is retained; only presenter/tutor metadata and web-layout noise are removed, while formatting is improved for readability. Session 13: Esters of Pharmaceutical Importance. Total Session Time: 120 minutes Prerequisites • None Learning Tasks By the end of this session students are expected to be able to: • Define esters • Explain nomenclature of esters • Draw chemical structure of esters • List chemical properties of esters • Explain chemical reactions of esters Resources Needed: • Flip charts, marker pens, and masking tape • Black/white board and chalk/whiteboard markers SESSION OVERVIEW |Step |Time |Activity/ |Content | | | |Method | | |1 |05 minutes |Presentation |Introduction, Learning Tasks | |2 |10 minutes |Brainstorming |Definition of Esters | | | |Presentation | | |3 |15 minutes |Presentation |Nomenclature of Esters | |4 |15 minutes |Presentation |Chemical Structure of Esters | |5 |20 minutes |Buzzing |Chemical Properties of Esters | | | |Presentation | | |6 |40 minutes |Group |Chemical Reactions involving Esters | | | |discussion | | | | |Presentation | | |7 |05 minutes |Presentation |Key Points | |8 |10 minutes |Presentation |Evaluation | SESSION CONTENTS STEP 1: Presentation of Session Title and Learning Tasks (5 minutes) READ or ASK students to read the learning tasks and clarify. ASK students if they have any questions before continuing. STEP 2: Definition of Esters (10 minutes) |Activity: Brainstorming (5 minutes) | | | |Ask students to brainstorm on the following question: | | | |What is Ester? | | | |ALLOW few students to respond. | | | |WRITE their responses on the flip chart/ board. | | | |CLARIFY and SUMMARISE by using the content below | • An ester (“carboxylic ester” in the textbook) is a derivative of a carboxylic acid in which there is a carbon group connected to the single- bonded oxygen: • In an ester, The H in the carboxyl group is replaced with an alkyl group. [pic] [pic] Some common esters are as follows; [pic] STEP 3: Nomenclature of Esters (15 minutes). • Name the alkyl or aromatic portion contributed by the “alcohol part” first. [pic] • The “acid part” is named as a carboxylic acid, with the -ic acid suffix changed to -ate [pic] [pic] STEP 4: Chemical Structure of Esters (15 minutes). • Esters contain a carbonyl center, which gives rise to 120-degree C-C-O and O-C-O bond angles due to sp2 hybridization. • Unlike amides, esters are structurally flexible functional groups because rotation about the C-O-C bonds has a lower energy barrier. • Their flexibility and low polarity affect their physical properties on a macroscopic scale. • They tend to be less rigid, leading to a lower melting point, and more volatile, leading to a lower boiling point, than the corresponding amides. • The pKa of the alpha-hydrogens, or the hydrogens attached to the carbon adjacent to the carbonyl, on esters is around 25, making them essentially non-acidic except in the presence of very strong bases. [pic] • An ester is characterized by the orientation and bonding of the atoms shown, where R and R’ are both carbon-initiated chains of varying length, also known as alkyl groups. • As usual, R and R’ are either alkyl groups or groups initiating with carbon. • Esters are derivative of carboxylic acids where the hydroxyl (OH) group has been replaced by an alkoxy (O-R) group. • They are commonly synthesized from the condensation of a carboxylic acid with an alcohol. STEP 5: Chemical Properties of Esters (20 minutes). |Activity: Buzzing (5minutes) | | | |ASK students to pair up and buzz on the following question for 5 | |minutes | | | |What are the chemical properties of Esters? | | | |ALLOW pairs to respond on the question | | | |WRITE their response on the flip chart/board | | | |CLARIFY and SUMMARIZE by using the content in the table 1 below | In acid hydrolysis • An ester reacts with water to produce a carboxylic acid and an alcohol. • An acid catalyst is required. [pic] Base hydrolysis Base hydrolysis is the reaction of an ester with a strong base. Produces the salt of the carboxylic acid and an alcohol. [pic] STEP 6: Chemical Reactions involving Esters (40 minutes). |Activity: Small Group Discussion (15 minutes) | | | |DIVIDE students into small groups | | | |ASK students to discuss in groups on the following questions | |What are the chemical reactions involving Esters? | | | |[pic]REFER Students to Book | | | |ALLOW students to discuss for 10 minutes | | | |ALLOW each group to present for 5 minutes | | | |CLARIFY and SUMMARIZE by using the contents below | Esterification Reaction • The simplest way to synthesize an ester is to heat a carboxylic acid with an alcohol or phenol (plus an acid catalyst). o The oxygen of the alcohol adds to the carboxyl group, splitting out a molecule of water in the process (an esterification reaction). [pic] • Since this reaction is a reversible reaction, it often reaches an equilibrium with a large amount of unreacted starting material still present. • Better yields are obtained using either acid chlorides or acid anhydrides as starting materials. o These reactions are nonreversible [pic] Examples [pic] Ester Hydrolysis • Esters may be broken apart under acidic conditions by water (a hydrolysis reaction) to form a carboxylic acid and an alcohol. [pic] • This is essentially the reverse reaction of the synthesis of esters from carboxylic acids and alcohols. Base hydrolysis (Saponification) Esters may be broken apart under basic conditions by sodium hydroxide (lye) or potassium hydroxide to form carboxylate salts and alcohols. [pic] This reaction is important in the production of soaps STEP 8: Key Points (05 minutes) • An ester is a chemical compound derived from carboxylic acid in which

Pharmaceutical Sciences Notes, PST Level 5 Semester 1, PST NTA Level 5, PST05106 Pharmaceutical Organic Chemistry

Carboxylic Acids of Pharmaceutical Importance – PST05106 Pharmaceutical Organic Chemistry

NTA Level 5 • Semester 1 • PST05106 Carboxylic Acids of Pharmaceutical Importance Pharmaceutical Organic Chemistry • Source Session/Topic 12 Full source-text version: all educational wording from the extracted learning source is retained; only presenter/tutor metadata and web-layout noise are removed, while formatting is improved for readability. Session 12: Carboxylic Acids of Pharmaceutical Importance. Total Session Time: 120 minutes Prerequisites • None Learning Tasks. By the end of this session students are expected to be able to: • Define carboxylic acids • Explain nomenclature of carboxylic acids • Draw chemical structure of carboxylic acids • List chemical properties of carboxylic acids • Explain chemical reactions of carboxylic acids Resources Needed: • Flip charts, marker pens, and masking tape. • Black/white board and chalk/whiteboard markers. SESSION OVERVIEW |Step |Time |Activity/ |Content | | | |Method | | |1 |05 minutes |Presentation |Introduction, Learning Tasks | |2 |10 minutes |Brainstorming |Definition of Carboxylic Acids | | | |Presentation | | |3 |15 minutes |Presentation |Nomenclature of Carboxylic Acids | |4 |15 minutes |Presentation |Chemical Structure of Carboxylic | | | | |Acids | |5 |15 minutes |Buzzing |Chemical Properties of Carboxylic | | | |Presentation |Acids | |6 |40 minutes |Group |Chemical Reactions involving | | | |discussion |Carboxylic Acids | | | |Presentation | | |7 |10 minutes |Presentation |Key Points | |8 |10 minutes |Presentation |Evaluation | SESSION CONTENTS STEP 1: Presentation of Session Title and Learning Tasks (5 minutes) READ or ASK students to read the learning tasks and clarify ASK students if they have any questions before continuing. STEP 2: Definition of Carboxylic Acids (10 minutes). |Activity: Brainstorming (5 minutes) | | | |Ask students to brainstorm on the following question: | | | |What is carboxylic acid? | | | |ALLOW few students to respond | | | |WRITE their responses on the flip chart/ board | | | |CLARIFY and SUMMARISE by using the content below | • The combination of a carbonyl group and a hydroxyl on the same carbon atom is called a carboxyl group. • Compounds containing the carboxyl group are distinctly acidic and are called carboxylic acids. [pic] Condensed structures [pic] • Therefore, carboxylic acids are acidic organic compounds containing the carboxyl group as a functional group, attached to hydrogen HCOOH or an alkyl group as RCOOH or an aryl group as ArCOOH • The general formula would be CnH(2n+1)COOH or R-CO2H. STEP 3: Nomenclature of Carboxylic Acids (15 minutes). IUPAC Names • The IUPAC nomenclature for carboxylic acids uses the name of the alkane that corresponds to the longest continuous chain of carbon atoms. • The final -e in the alkane name is replaced by the suffix -oic acid. • The chain is numbered, starting with the carboxyl carbon atom, to give positions of substituents along the chain. In naming, the carboxyl group takes priority over any of the functional groups discussed previously =Examples [pic] [pic] [pic] [pic] [pic] [pic] [pic] [pic] Some more examples of traditional names most widely used are: • Formic acid- HCOOH • Acetic acid – CH3COOH • Propionic acid – CH3CH2COOH • Butyric acid – CH3(CH2)2COOH • Valeric acid – CH3(CH2)3COOH • Caproic acid – CH3(CH2)4COOH • Capyrylic acid – CH3(CH2)6COOH • Capric acid – CH3(CH2)8COOH STEP 4: Chemical Structure of Carboxylic Acids (15 minutes) • The CO2H unit is planar and consistent with sp2 hybridization and a resonance interaction of the lone pairs of the hydroxyl oxygen with the π system of the carbonyl. | Carboxylic Acid | | | | |Structure | | |Ethanoic acid |CH3CO2H | | |Propanoic acid |CH3CH2CO2H | | |Fluoroethanoic acid |CH2FCO2H | | |Chloroethanoic acid |CH2ClCO2H | | |Dichloroethanoic acid |CHCl2CO2H | | |Trichloroethanoic acid |CCl3CO2H | | |Nitroethanoic acid |O2NCH2CO2H | | STEP 5: Chemical Properties of Carboxylic Acids (15 minutes). |Activity: Buzzing (10minutes) | | | |ASK students to pair up and buzz on the following question for 5 | |minutes | | | |What are the chemical properties of carboxylic acid? | | | |ALLOW pairs to respond on the question | | | |WRITE their response on the flip chart/board | | | |CLARIFY and SUMMARIZE by using the content in the table 1 below | The following are chemical properties of carboxylic acids; Acidity of Carboxylic Acids Carboxylic acids are weak acids and their carboxylic anions are strong conjugate bases are slightly alkaline due to the hydrolysis of carboxylate anion compared to other species, the order of acidity and basicity or corresponding conjugate bases are as follows: Acidity RCOOH > HOH > ROH > HC[pic] CH > NH3 > RH Basicity RCOO– < HO– < RO– < HCC– < NH2-< R– Reaction of Carboxylic Acids with Metals • The carboxylic acids react with metals to liberate hydrogen and are soluble in both NaOH and NaHCO3 solutions. For example; ▪ 2CH3COOH + 2Na → 2CH3COO–Na+ + H2 ▪ CH3COOH + NaOH → CH3COO–Na+ + H2O ▪ CH3COOH + NaHCO3 → CH3COO–Na+ + H2O + CO2 • Carboxylic acids dissociate in water to give resonance stabilised carboxylate anions and hydronium ion. [pic] Effect of substituents on the acidity of Carboxylic Acids • Any factor that stabilizes the anion more than it stabilizes the acid would increase the acidity of carboxylic acids. • While any factor that decreases the stability of anion would decrease the acidity of carboxylic acids. • Electron withdrawing groups disperse the negative charge and thus stabilize the anion which results in increase in acidity of the carboxylic acids. • Electron donating groups intensify the negative charge and destabilize the anion which results in decrease in acidity of carboxylic acid. [pic] Conversion of Carboxylic Acids into functional derivatives • Carboxylic acids can be converted into number of other compounds (known as derivatives of carboxylic acids or simply acid derivatives) by replacement of its –OH group by a Cl, OR or NH2 . o Replacement of -OH by -Cl forms acid chlorides. o Replacement of -OH by -OR forms ester. o Replacement of -OH

Pharmaceutical Sciences Notes, PST Level 5 Semester 1, PST NTA Level 5, PST05106 Pharmaceutical Organic Chemistry

Alcohols of Pharmaceutical Importance – PST05106 Pharmaceutical Organic Chemistry

NTA Level 5 • Semester 1 • PST05106 Alcohols of Pharmaceutical Importance Pharmaceutical Organic Chemistry • Source Session/Topic 11 Full source-text version: all educational wording from the extracted learning source is retained; only presenter/tutor metadata and web-layout noise are removed, while formatting is improved for readability. Session 11: Alcohols of Pharmaceutical Importance. Total Session Time: 120 minutes Prerequisites None Learning Tasks By the end of this session students are expected to be able to: • Define alcohols • List alcohols and their isomers • Explain nomenclature of alcohols • Draw chemical structure of alcohols • List chemical properties of alcohols • Explain chemical reactions of alcohols Resources Needed: • Flip charts, marker pens, and masking tape. • Black/white board and chalk/whiteboard markers. SESSION OVERVIEW |Step |Time |Activity/ |Content | | | |Method | | |1 |05 minutes |Presentation |Introduction, Learning Tasks | |2 |10 minutes |Brainstorming |Definition of Alcohols | | | |Presentation | | |3 |15 minutes |Presentation |Alcohols and their Isomers | |4 |15 minutes |Presentation |Nomenclature of Alcohols | |5 |15 minutes |Presentation |Chemical Structure of Alcohols | |6 |15 minutes |Presentation |Chemical Properties of Alcohols | | | |Buzzing | | |7 |35 minutes |Group |Chemical Reactions involving | | | |discussion |Alcohols | | | |Presentation | | |8 |05 minutes |Presentation |Key Points | |9 |05 minutes |Presentation |Evaluation | SESSION CONTENTS. STEP 1: Presentation of Session Title and Learning Tasks (5 minutes) READ or ASK students to read the learning tasks and clarify ASK students if they have any questions before continuing. STEP 2: Definition of Alcohols (10 minutes). |Activity: Brainstorming (5 minutes) | | | |Ask students to brainstorm on the following question: | | | |What are Alcohols? | | | |ALLOW few students to respond. | | | |WRITE their responses on the flip chart/ board. | | | |CLARIFY and SUMMARISE by using the content below | • Alcohols are a family of organic compounds containing a hydroxyl (OH) group bonded to an sp3 hybridized carbon atom. • The general formula is CnH(2n+1)OH or R-OH. • Alcohols are named in similar manner as in alkenes except that the suffix –e from alkanes is replace by –ol. • Alcohols are classified into three groups: primary, secondary, and tertiary, depending on the carbon atom bonded to the – OH group. • If the carbon atom is primary (bonded to one other carbon atom), the compound is a primary alcohol. • If the OH group is attached to a carbon atom that is joined to two other carbon atoms, it is a secondary alcohol, and the carbon atom to which it is attached is a secondary carbon atom. • If the OH group is attached to a carbon atom that is joined to three other carbon atoms, it is a tertiary alcohol, and the carbon atom to which it is attached is a tertiary carbon atom. Primary alcohols [pic] [pic] [pic] STEP 3: Alcohols and their Isomers (15 Minutes). • Alcohols exhibit following three types of isomerism. o Chain isomerism. o Position isomerism. o Functional isomerism. Chain isomerism • Alcohols containing at least 4-carbon atoms form chain isomerism due to the different structure of C-skeleton in the longest chain. [pic] Position isomerism • Alcohols containing at least 3 C atoms form position isomerism due to a different position of a hydroxyl group (OH). Example [pic] Functional isomer • Alcohols containing at least 2 carbon atoms give functional isomers. The functional isomer of an alcohol is ether. Example [pic] STEP 4: Nomenclature of Alcohols (15 minutes). • The IUPAC system provides unique names for alcohols, based on rules that are similar to those for other classes of compounds. • In general, the name carries the -ol suffix, together with a number to give the location of the hydroxyl group Rules 1. Select the longest continuous carbon atom chain containing the carbinol (hydroxyl) group(s). 2. Number the chain, giving the hydroxyl (alcohol) substituent(s) the lowest number possible. 3. Name the longest chain as an alkane, but drop the terminal -e and add -ol. Ethane would become ethanol. 4. For monohydric alcohols the letter ‘-e’ at the end of the root name is replaced by the ending ‘-ol’ with a number, when necessary, to show the position of the –OH group on the carbon skeleton. [pic] 5. If more than one hydroxyl group is present (for polyols i.e. dihydric,trihydric etc.) the name becomes -diol, -triol, etc. and the terminal -e in the parent name is not dropped from the alkane name. But the letters ‘diol’ ‘triol’ etc & numbers 1,2,3 etc are added to the ending to show how many –OH groups & their position • For example ethane with two hydroxyl groups would become ethanediol. • Since the hydroxyl groups could be on or different carbon atoms, one needs to specify where the hydroxyl groups are attached. • The name would be 1,2-ethanediol if the hydroxyl groups are on adjacent (vicinal) carbon atoms. • Updated nomenclature rules suggest that the position of substituent attachment should precede the functional group name, e.g., ethane-1,2- diol rather than 1,2-ethanediol. 6. Indicate by numbers the positions of other groups attached to the parent chain • OH group takes priority (even over -ene or -yne) [pic] • Considering the example below: [pic] • The complete IUPAC name is 1-bromo-3,3-dimethyl-2-butanol. • The new IUPAC positioning of numbers would place the 2 next to the group it locates (-ol), giving the name 1-bromo-3,3-dimethylbutan-2- ol. 7. Cyclic alcohols are named using the prefix cyclo-; the hydroxyl group is assumed to be on carbon number 1, C1. [pic] [pic] STEP 5: Chemical Structure of Alcohols (15 minutes). • Alcohols fall into different classes depending on how the -OH group is positioned on the chain of carbon atoms. There are some chemical differences between the various types. Primary alcohols • In a primary (1°) alcohol, the carbon atom that carries the -OH group is only attached to one alkyl group. Some examples of

Pharmaceutical Sciences Notes, PST Level 5 Semester 1, PST NTA Level 5, PST05106 Pharmaceutical Organic Chemistry

Alkynes of Pharmaceutical Importance – PST05106 Pharmaceutical Organic Chemistry

NTA Level 5 • Semester 1 • PST05106 Alkynes of Pharmaceutical Importance Pharmaceutical Organic Chemistry • Source Session/Topic 10 Full source-text version: all educational wording from the extracted learning source is retained; only presenter/tutor metadata and web-layout noise are removed, while formatting is improved for readability. Session 10: Alkynes of Pharmaceutical Importance. Total Session Time: 120 minutes Prerequisites None Learning Tasks By the end of this session students are expected to be able to: • Define alkynes • List alkynes and their isomers • Explain nomenclature of alkynes • Draw chemical structure of alkynes • List physical properties of alkynes • Explain chemical reactions of alkynes Resources Needed: • Flip charts, marker pens, and masking tape. • Black/white board and chalk/whiteboard markers. SESSION OVERVIEW |Step |Time |Activity/ |Content | | | |Method | | |1 |05 minutes |Presentation |Introduction, Learning Tasks | |2 |10 minutes |Brainstorming |Definition of Alkynes | | | |Presentation | | |3 |15 minutes |Buzzing |Alkynes and their Isomers | | | |Presentation | | |4 |15 minutes |Presentation |Nomenclature of Alkynes | |5 |15 minutes |Presentation |Chemical Structure of Alkynes | |6 |10 minutes |Brainstorming |Physical Properties of Alkynes | | | |Presentation | | |7 |40 minutes |Group |Chemical Reactions involving Alkynes| | | |discussion | | | | |Presentation | | |8 |05 minutes |Presentation |Key Points | |9 |05 minutes |Presentation |Evaluation | SESSION CONTENTS. STEP 1: Presentation of Session Title and Learning Tasks (5 minutes). READ or ASK students to read the learning tasks and clarify. ASK students if they have any questions before continuing. STEP 2: Definition of Alkynes (10 minutes). |Activity: Brainstorming (5 minutes) | | | |Ask students to brainstorm on the following question: | | | |What are Alkynes? | | | |ALLOW few students to respond | | | |WRITE their responses on the flip chart/ board | | | |CLARIFY and SUMMARISE by using the content below | • These are unsaturated hydrocarbons, they contain four less hydrogen atoms as compared to corresponding alkanes, also known as Acetylenes, general formula: (CnH2n-2). • They contain carbon-carbon triple bond, this is the distinguishing feature of the alkynes. • The simplest member of the alkyne family is ethylene C2H2. STEP 3: Alkynes and their Isomers (15 minutes). |Activity: Buzzing (10minutes) | | | |ASK students to pair up and buzz on the following question for 5 | |minutes. | | | |What are the isomers of Alkynes? | | | |ALLOW pairs to respond on the question. | | | |WRITE their response on the flip chart/board. | | | |CLARIFY and SUMMARIZE by using the content in the table 1 below | Structural isomerism • Isomers which have the atoms of their molecules linked in a different order • This can come about in one of three ways: o Chain Isomerism. ▪ Chain isomers of the same compound are very similar. ▪ There may be small difference in physical properties such as melting or boiling point due to different strengths of intermolecular bonding. ▪ Their chemistry is likely to be identical. o Positional Isomer ▪ Positional isomers are also usually similar. ▪ There are slight physical differences, but the chemical properties are usually very similar. ▪ However, occasionally, positional isomers can have quite different properties STEP 4: Nomenclature of Alkynes (15 minutes). • The IUPAC Rules are similar to those of alkanes, but few new rules must be added to name and locate the triple bond. o Rule 1: Select as the parent structure the longest continuous chain that contains the C-C triple bond: ▪ C-C triple bonds are designated by the ending -yne, if more than one triple bond is present, the ending is diyne, triyne, tetrayne, etc. o Rule 2: Indicate by a number the position of the triple bond in the chain. Number it so that the C-atoms in the triple bond have the lowest possible numbers. o Rule 3: The position of the triple bond(s) is indicated by the number(s) of the lower numbered carbon atom of each triple bond. These numbers are placed in front of the name of the compound. Examples o [pic] [pic] o [pic][pic] o [pic][pic] o Rule 4: In cyclic hydrocarbons, start numbering around the ring with the carbons of the double bond indicates by numbers the positions of alkyl groups attached to the parent chain. STEP 5: Chemical Structure of Alkynes (15 minutes). • The sigma bond is sp-sp overlap [pic] • The two pi bonds are unhybridized p overlaps at 90(, which blend into a cylindrical shape. [pic] • Bond Lengths • More s character, so shorter length than alkenes or alkanes.Three bonding overlaps, so shorter [pic] [pic] • Acidity Table [pic] Table 2: Chemical stuctures of alkynes CnH2n-2 | IUPAC Name | Molecular Formula |Condensed Structural | | | |Formula | |Ethyne |C2H2 |CHCH | |Propyne |C3H4 |CHCCH3 | |1-butyne |C4H6 |CHCCH2CH3 | |1-pentyne |C5H8 |CHC(CH2)2CH3 | |1-hexyne |C6H10 |CHC(CH2)3CH3 | |1-heptyne |C7H12 |CHC(CH2)4CH3 | |1-octyne |C8H14 |CHC(CH2)5CH3 | STEP 6: Physical Properties of Alkynes (10 minutes). |Activity: Brainstorming (5 minutes) | | | |Ask students to brainstorm on the following question: | | | |What are physical properties of Alkynes? | | | |ALLOW few students to respond. | | | |WRITE their responses on the flip chart/ board. | | | |CLARIFY and SUMMARISE by using the content below | • Nonpolar, insoluble in water • Soluble in most organic solvent • Boiling points similar to alkane of same size • Less dense than water • Up to 4 carbons, gas at room temperature STEP 7: Chemical Reactions involving Alkynes (40 minutes). |Activity: Small Group Discussion (20 minutes) | | | |DIVIDE students into small groups. | | | |ASK students to discuss in groups on the following questions | |What are the chemical properties of Alkanes? | | | |[pic]REFER Students to Book | | | |ALLOW students to discuss for 15 minutes. | | | |ALLOW each group to present

Pharmaceutical Sciences Notes, PST Level 5 Semester 1, PST NTA Level 5, PST05106 Pharmaceutical Organic Chemistry

Alkenes of Pharmaceutical Importance – PST05106 Pharmaceutical Organic Chemistry

NTA Level 5 • Semester 1 • PST05106 Alkenes of Pharmaceutical Importance Pharmaceutical Organic Chemistry • Source Session/Topic 9 Full source-text version: all educational wording from the extracted learning source is retained; only presenter/tutor metadata and web-layout noise are removed, while formatting is improved for readability. Session 9: Alkenes of Pharmaceutical Importance. Total Session Time: 120 minutes Prerequisites None Learning Tasks By the end of this session students are expected to be able to: • Define alkenes • List alkenes and their isomers • Explain nomenclature of alkenes • Draw chemical structure of alkenes • List chemical properties of alkenes • Explain chemical reactions of alkenes Resources Needed: • Flip charts, marker pens, and masking tape. • Black/white board and chalk/whiteboard markers. SESSION OVERVIEW |Step |Time |Activity/ |Content | | | |Method | | |1 |05 minutes |Presentation |Introduction, Learning Tasks | |2 |10 minutes |Brainstorming |Definition of Alkenes | | | |Presentation | | |3 |15 minutes |Buzzing |Alkenes and their Isomers | | | |Presentation | | |4 |15 minutes |Presentation |Nomenclature of Alkenes | |5 |15 minutes |Presentation |Chemical Structure of Alkenes | |6 |10 minutes |Presentation |Chemical Properties of Alkenes | | | |Brainstorming | | |7 |40 minutes |Group |Chemical Reactions and Uses of | | | |discussion |Alkenes | | | |Presentation | | |8 |05 minutes |Presentation |Key Points | |9 |05 minutes |Presentation |Evaluation | SESSION CONTENTS. STEP 1: Presentation of Session Title and Learning Tasks (5 minutes). READ or ASK students to read the learning tasks and clarify. ASK students if they have any questions before continuing. STEP 2: Definition of Alkenes (5 minutes). |Activity: Brainstorming (5 minutes) | | | |Ask students to brainstorm on the following question: | | | |What are Alkenes? | | | |ALLOW few students to respond. | | | |WRITE their responses on the flip chart/ board. | | | |CLARIFY and SUMMARISE by using the content below | • These are unsaturated hydrocarbons, they contain two less hydrogen atoms as compared to corresponding alkanes (sp2 hybrid), also known as OLEFINS or ALKYLENES, general formula: (CnH2n). • They contain carbon-carbon double bond, this is the distinguishing feature of the alkenes. • The simplest member of the alkene family is ethylene C2H2. STEP 3: Alkenes and their Isomers (15 minutes). |Activity: Buzzing (10minutes) | | | |ASK students to pair up and buzz on the following question for 5 | |minutes. | | | |What is the isomer of Alkenes? | | | |ALLOW pairs to respond on the question. | | | |WRITE their response on the flip chart/board. | | | |CLARIFY and SUMMARIZE by using the content in the table 1 below | Geometric isomerism • Arises due to restricted rotation at the C-C double bonds • Occurs only when two atoms/groups attached to each carbon of the double bond are different from one another • The cis-isomer has like groups on the same side of the double bond, whereas the trans-isomer has like group on opposite sides of the double bond Example, [pic] Cis Butene (the methyl groups are on the same side) [pic] Trans Butene (the methyl groups are on the opposite side) Structural isomerism • Isomers which have the atoms of their molecules linked in a different order • This can come about in one of three ways: o Chain Isomerism [pic] [pic][pic] ▪ Chain isomers of the same compound are very similar. ▪ There may be small difference in physical properties such as melting or boiling point due to different strengths of intermolecular bonding. ▪ Their chemistry is likely to be identical. o Positional Isomers [pic] [pic] ▪ Positional isomers are also usually similar. ▪ There are slight physical differences, but the chemical properties are usually very similar. ▪ However, occasionally, positional isomers can have quite different properties Example of isomerism is given by propanol • It has the formula C3H8O (or C3H7OH) and two isomers propan-1-ol (n-propyl alcohol; I) and propan-2-ol (isopropyl alcohol; II) • Note that the position of the oxygen atom differs between the two: it is attached to an end carbon in the first isomer, and to the center carbon in the second. • The number of possible isomers increases rapidly as the number of atoms increases; For example; the next largest alcohol, named butanol (C4H10O), has four different structural isomers. [pic] [pic] STEP 4: Nomenclature of Alkenes (15 minutes). • The IUPAC Rules are similar to those of alkanes, but few new rules must be added to name and locate the double bond. o Rule 1: Select as the parent structure the longest continuous chain that contains the C-C double bond: ▪ C-C double bonds are designated by the ending -ene, if more than one double bond is present, the ending is diene, triene, tetraene, etc. o Rule 2: Indicate by a number the position of the double bond in the chain. Number it so that the C-atoms in the double bond have the lowest possible numbers. o Rule 3: The position of the double bond(s) is indicated by the number(s) of the lower numbered carbon atom of each double bond. These numbers are placed in front of the name of the compound. Example, [pic] o Rule 4: In cyclic hydrocarbons, start numbering around the ring with the carbons of the double bond indicates by numbers the positions of alkyl groups attached to the parent chain. Example, [pic] 3-Methylcyclopenten Table 1. Nomenclature of simple alkenes |COMPOUND |COMMON NAME |IUPAC NAME | |CH2=CH2 |Ethylene |Ethene | |CH3CH=CH2 |Propylene |1-Propene | |CH3CH2CH=CH2 |α-Butylene |1-Butene | |CH3C(CH3)=CH2 |Isobutylene |2-Methylpropene | |CH2=C(C2H5)CH2CH3 |- |2-Ethyl-1-butene | |CH2=CHCl |Vinyl chloride |Chloroethene | |CH2=CHCH2Cl |Allyl chloride |3-Chloropropene | |CH3=CHCH=CH2 | |1,3-Butadiene | STEP 5: Chemical Structure of Alkenes (15 minutes). Definition • The arrangement of chemical bonds between atoms in a molecule (or in an iron or radical with multiple atoms) especially which atoms are chemically bonded to what other atoms with what kind of chemical bonds, together with

Pharmaceutical Sciences Notes, PST Level 5 Semester 1, PST NTA Level 5, PST05106 Pharmaceutical Organic Chemistry

Alkanes of Pharmaceutical Importance – PST05106 Pharmaceutical Organic Chemistry

NTA Level 5 • Semester 1 • PST05106 Alkanes of Pharmaceutical Importance Pharmaceutical Organic Chemistry • Source Session/Topic 8 Full source-text version: all educational wording from the extracted learning source is retained; only presenter/tutor metadata and web-layout noise are removed, while formatting is improved for readability. Session 8: Alkanes of Pharmaceutical Importance. Total Session Time: 120 minutes Prerequisites • None Learning Tasks By the end of this session students are expected to be able to: • Define alkanes • List alkanes and their isomers • Explain nomenclature of alkanes • Draw chemical structure of alkanes • List chemical properties of alkanes • Explain chemical reactions of alkanes Resources Needed: • Flip charts, marker pens, and masking tape. • Black/white board and chalk/whiteboard markers. SESSION OVERVIEW |Step |Time |Activity/ |Content | | | |Method | | |1 |05 minutes |Presentation |Introduction, Learning Tasks | |2 |10 minutes |Brainstorming |Definition of Alkanes | | | |Presentation | | |3 |15 minutes |Buzzing |Alkanes and their Isomers | | | |Presentation | | |4 |15 minutes |Presentation |Nomenclature of Alkanes | |5 |15 minutes |Presentation |Chemical Structure of Alkanes | |6 |10 minutes |Brainstorming |Chemical Properties of Alkanes | | | |Presentation | | |7 |30 minutes |Group |Chemical Reactions and Uses of | | | |discussion |Alkanes | | | |Presentation | | |8 |10 minutes |Presentation |Key Points | |9 |10 minutes |Presentation |Evaluation | SESSION CONTENTS STEP 1: Presentation of Session Title and Learning Tasks (5 minutes) READ or ASK students to read the learning tasks and clarify ASK students if they have any questions before continuing. STEP 2: Definition of Alkanes (10 minutes). |Activity: Brainstorming (5 minutes) | | | |Ask students to brainstorm on the following question: | | | |What is Alkane? | | | |ALLOW few students to respond. | | | |WRITE their responses on the flip chart/ board. | | | |CLARIFY and SUMMARISE by using the content below; | • Alkane or Paraffin is an acyclic saturated hydrocarbon composed of only carbons and hydrogen atoms and contain carbon-carbon single bonds. • Compounds that contain only carbon and hydrogen are called hydrocarbons. Homologous series (homo is Greek for “the same as”) is a family of compounds in which each member differs from the next by one methylene group (CH2). • The general molecular formula for an alkane is CnH2n+2 where n is an integer. • Members (CnH2n+2) o Methane CH4 o Ethane C2H6 o Propane C3H8 o Butane C4H10 o Pentane C5H12 o Hexane C6H14 o Heptane C7H16 o Octane C8H18 o Nonane C9H20 o Decane C10H22 o Undecane C11H24 etc • So, if an alkane has one carbon atom, it must have four hydrogen atoms; if it has two carbon atoms, it must have six hydrogen. NOTE; Only one possible structure for an alkane with molecular formula CH4 (methane) and molecular formula C2H6 (ethane) • There are two possible structures for an alkane straight-chain and a branched structure. • Both of these structures fulfill the requirement that each carbon forms four bonds and each hydrogen forms only one bond. STEP 3: Alkanes and their Isomers (15 minutes). |Activity: Buzzing (5minutes) | | | |ASK students to pair up and buzz on the following question for 5 | |minutes. | | | |What is an isomer? | |What is isomerism? | |ALLOW pairs to respond on the question. | | | |WRITE their response on the flip chart/board. | | | |CLARIFY and SUMMARIZE by using the content below | • Isomers Refers to different compounds having the same molecular formula but different structural formula (have different arrangements of atoms in space). • In n-alkanes, no carbon is bonded to more than two other carbons, give rise to a linear chain. • When carbon is bonded to more than two other carbons, a branched is formed. Example.1; C6H14 has 5 isomers as follows: o Hexane o 2-Methylpentane o 3-Methylpentane o 2,2-Dimethylbutane o 2,3-Dimethylbutane Example.2; C7H16 has 9 isomers as follows: o Heptane o 2-Methylhexane o 3-Methylhexane o 2,2-Dimethylpentane o 2,3-Dimethylpentane o 2,4-Dimethylpentane o 3,3-Dimethylpentane o 3-Ethylpentane o 2,2,3-Trimethylbutane Example 3; C5H12 has 3 isomers which are: o Pentane o 2-Methylbutane o 2,2-Dimethylpropane Example 4; C4H10 has 2 isomers which are; o Butane o 2-Methylpropane STEP 4: Nomenclature of Alkanes (15 Minutes). • Rule1. Determine the longest continuous carbon chain. o This chain is called the parent hydrocarbon. • Rule 2. In isomeric compounds (II and III), indicate by a number the Carbon to which the alkyl group is attached. • Rule 3. In numbering the parent chain, start at whichever end resulting in the use of the lowest numbers; thus, II is called 2–‐ methylpentane rather than 4–‐ methylpentane. • Rule 4. If the same alkyl group occurs more than once as a side chain, indicate this by the prefix di-, tri-, tetra- etc., to show how many of these alkyl groups are there and indicate by various numbers the position of each group, as in 2,2,4‐trimethyl-pentane. [pic] • Rule 5 If there are several different alkyl groups attached to the parent chain, name them in alphabetical order, as in 3,3‐diethyl-5- isopropyl-4-methyloctane [pic] STEP 5: Chemical Structure of Alkanes (15 minutes). • All acyclic alkanes (unbranded and branched) have the characteristic molecular formula CnH2n+2, where n is the number of carbon atoms in the chain. • Gives the molecular formulas and Lewis structure for the unbranched and n-alkanes (n stands for normal) [pic] STEP 6: Chemical Properties of Alkanes (10 minutes). |Activity: Brainstorming (5minutes) | | | |ASK students to pair up and brainstorm on the following question for 5 | |minutes. | | | |What are the chemical properties of Alkanes? | | | |ALLOW pairs to respond on the question | | | |WRITE their response on the flip chart/board | | | |CLARIFY and SUMMARIZE by using the content in the table 1 below | • Combustion o Complete combustion (Under sufficient amount of oxygen (Air)) any hydrocarbon produces carbon

Pharmaceutical Sciences Notes, PST Level 5 Semester 1, PST NTA Level 5, PST05106 Pharmaceutical Organic Chemistry

Isomerism – PST05106 Pharmaceutical Organic Chemistry

NTA Level 5 • Semester 1 • PST05106 Isomerism Pharmaceutical Organic Chemistry • Source Session/Topic 7 Full source-text version: all educational wording from the extracted learning source is retained; only presenter/tutor metadata and web-layout noise are removed, while formatting is improved for readability. Session 7: Isomerism. Total Session Time: 60 minutes Prerequisites • None Learning Tasks By the end of this session students are expected to be able to: • Define isomer and isomerism • List types of isomers • Explain types of isomers • Explain the importance of isomerism in pharmacy Resources Needed: • Flip charts, marker pens, and masking tape • Black/white board and chalk/whiteboard markers SESSION OVERVIEW |Step |Time |Activity/ |Content | | | |Method | | |1 |05 minutes |Presentation |Introduction, Learning Tasks | |2 |15 minutes |Buzzing |Definition of Isomer and Isomerism | | | |Presentation | | |3 |40 minutes |Group |Types of Isomers | | | |discussion | | | | |Presentation | | |4 |40 minutes |Presentation |Importance of Isomerism in Pharmacy | | | |Brainstorming | | |5 |10 minutes |Presentation |Key Points | |6 | | Presentation |Evaluation | | |10 minutes | | | SESSION CONTENTS STEP 1: Presentation of Session Title and Learning Tasks (5 minutes) READ or ASK students to read the learning tasks and clarify. ASK students if they have any questions before continuing. STEP 2: Definition of Isomer and Isomerism (15 minutes). |Activity: Buzzing (10 minutes) | | | |ASK students to pair up and buzz on the following question for 5 | |minutes | | | |What is an isomer? | |What is isomerism? | |ALLOW pairs to respond on the question. | | | |WRITE their response on the flip chart/board. | | | |CLARIFY and SUMMARIZE by using the content in the table 1 below | • Isomers are compound having same molecular formula but different structural formula • Isomerism is the existence of a compound with the same molecular formula but different structural formula STEP 3: Types of Isomerism (40 minutes). |Activity: Small Group Discussion (20 minutes) | | | |DIVIDE students into small groups | | | |ASK students to discuss in groups on the following questions | |What are the types of isomerism | | | |[pic]REFER Students to Book | | | |ALLOW students to discuss for 15 minutes | | | |ALLOW each group to present for 5 minutes | | | |CLARIFY and SUMMARIZE by using the contents below | The following are the descriptions of types of isomerism; • Geometric isomerism • Structural isomerism • Constitutional isomerism • Sterioisomerism • Geometric isomerism. o Arises due to restricted rotation across the C-C double bonds. o Occurs only when two atoms/groups attached to each carbon of the double bond are different from one another. o This type of isomerism is also known as cis-trans isomerism. o The cis-isomer has like groups on the same side of the double bond, whereas the trans-isomer has like group on opposite sides of the double bond. Example, [pic] o Cis Butene (the methyl groups are on the same side) [pic] o Trans Butene (the methyl groups are on the opposite side) o Another way to name the cis-trans isomers is to use the Z and E nomenclature [pic] E E = Entgegen in German, Z = Zusammen, means together which means on opposite sides. • Structural isomerism. o These are Isomers which have the atoms of their molecules linked in a different order o The structural isomerism is further subdivided in the following categories; ▪ Chain Isomerism ▪ Positional Isomerism ▪ Functional Group Isomerism Chain Isomerism • Chain isomers are the compounds having the same molecular formula but different arrangement of carbon chain within the molecule. • Chain isomers are also known as skeletal isomers or nuclear isomers. • Chain isomers of the same compound are very similar. • There may be small difference in physical properties such as melting or boiling point due to different strengths of intermolecular bonding. • Their chemistry is likely to be identical. [pic] Positional Isomerism • Position isomers are the compounds which have the same molecular formula and same carbon skeleton but differ in the position of attached atoms or groups or in position of multiple bonds. • Positional isomers are also usually similar. • There are slight physical differences, but the chemical properties are usually very similar. • However, occasionally, positional isomers can have quite different properties. [pic] • A simple example of isomerism is given by propanol: • it has the formula C3H8O (or C3H7OH) and two isomers propan-1-ol (n- propyl alcohol; I) and propan-2-ol (isopropyl alcohol; II) • Note that the position of the oxygen atom differs between the two: it is attached to an end carbon in the first isomer and to the center carbon in the second. • The number of possible isomers increases rapidly as the number of atoms increases; for example, the next largest alcohol, named butanol (C4H10O), has four different structural isomers. [pic] Functional Group Isomers • Functional group isomers are the compounds having the same molecular formula but different functional groups. • Functional group isomers are likely to be both physically and chemically dissimilar. [pic] • Constitutional Isomerism. o Isomers that differ in connectivity are called constitutional (sometimes structural) isomers. o They have the same parts, but those parts are attached to each other differently. o The bracelets of red and green beads mentioned above are analogous to constitutional isomers. o The simplest hydrocarbons—methane (CH4), ethane (CH3CH3), and propane (CH3CH2CH3)—have no constitutional isomers, as there is no other way to connect the carbons and hydrogens of these molecules consistent with the tetravalency of carbon and the univalency of hydrogen. [pic] o However, there are two different butanes, C4H10, and these two molecules, called butane and isobutane, are constitutional isomers. o They are different molecules with different chemical and physical properties. o Butane has its four carbon atoms bonded in a continuous chain. Isobutane has a

Pharmaceutical Sciences Notes, PST Level 5 Semester 1, PST NTA Level 5, PST05106 Pharmaceutical Organic Chemistry

Chemical Reaction in Organic Compounds – PST05106 Pharmaceutical Organic Chemistry

NTA Level 5 • Semester 1 • PST05106 Chemical Reaction in Organic Compounds Pharmaceutical Organic Chemistry • Source Session/Topic 6 Full source-text version: all educational wording from the extracted learning source is retained; only presenter/tutor metadata and web-layout noise are removed, while formatting is improved for readability. Session 6: Chemical Reaction in Organic Compounds. Total Session Time: 60 minutes Prerequisites • None Students Learning Tasks By the end of this session students are expected to be able to: • Define term chemical reaction • List types of chemical reactions in organic compounds • Explain chemical reactions in organic compounds Resources Needed: • Flip charts, marker pens, and masking tape. • Black/white board and chalk/whiteboard markers. SESSION OVERVIEW |Step |Time |Activity/ |Content | | | |Method | | |1 |05 minutes |Presentation |Introduction, Learning Tasks | |2 |15 minutes |Presentation |Definition of the term chemical | | | |Buzzing |reaction | |3 | |Group |Types of chemical reactions | | |30 minutes |discussion |involving organic compounds | | | |Presentation | | |4 |05 minutes |Presentation |Key Points | |5 | | Presentation |Evaluation | | |05 minutes | | | CONTENTS STEP 1: Presentation of Session Title and Learning Tasks (5 minutes) READ or ASK students to read the learning tasks and clarify. ASK students if they have any questions before continuing. STEP 2: Definition of Chemical Reaction (15 minutes) |Activity: Buzzing (10minutes) | | | |ASK students to pair up and buzz on the following question for 5 | |minutes | | | |What is chemical reaction? | | | |ALLOW pairs to respond on the question | | | |WRITE their response on the flip chart/board | | | |CLARIFY and SUMMARIZE by using the content in the table 1 below | Definition • A chemical reaction is process in which a substance is transformed into a new substance through chemical change, OR • Chemical reactions, a process in which one or more substances, the reactants, are converted to one or more different substances, the products, substances are either chemical elements or compounds. • A chemical reaction rearranges the constituent atoms of the reactants to create different substances as products. STEP 3: Types of Chemical Reactions Involving Organic Compounds (30 minutes). |Activity: Small Group Discussion (20 minutes) | | | |DIVIDE students into small manageable groups. | |ASK students to discuss on the following question. | | | |What are the types of chemical reactions involving organic compounds? | | | |ALLOW students to discuss for 15 minutes | |ALLOW few groups to present for 5 minutes and the rest to add points | |not mentioned. | | | |CLARIFY and SUMMARIZE by using the contents below | There are five main types of organic reactions that can take place. They are as follows: • Substitution reactions • Elimination reactions • Addition reactions • Radical reactions • Oxidation-Reduction Reactions Let us study each of these reactions in detail, to understand more about them. [pic] • Substitution Reactions o In a substitution reaction, one atom or a group of atoms take place of another atom or a group of atoms which leads to the formation of an altogether new substance. o We can take an example of C – Cl bond, in which the carbon atom usually has a partial positive charge due to the presence of highly electronegative chlorine atoms. o In a nucleophilic substitution reaction, it is important that the nucleophile must have a pair of electrons and it also should have a high affinity for the electropositive species in comparison to the substituent which was originally present in the element. o In order for the substitution reaction to occur, there are certain conditions that have to be present such as maintaining low temperatures same as room temperature. • Elimination Reactions o These are reactions which involve the elimination and removal of the adjacent atoms. o After these multiple bonds are simultaneously formed and there is a release of small molecules as product. o One of the examples of a typical elimination reaction is the conversion of ethyl chloride to ethylene. o CH3CH2Cl → CH2= CH2 + HCl o In the above reaction, the eliminated molecule is HCl, which can form out of the combination of H+ from the carbon atom which is on the left side and Cl– from the carbon atom which is on the right side. • Addition Reactions o An addition reaction is simply just the opposite of an elimination reaction. o In an addition reaction, the components or molecules of A and B are added to the carbon-carbon multiple bonds and this is called an addition reaction. o In the reaction given below when HCl is added to ethylene, it will give us ethylene chloride. HCl + CH2 = CH2 → CH3CH2Cl • Radical Reactions o Most of the organic reactions involve radicals and their movement. o Addition of a halogen to a typically saturated hydrocarbon involves free radical mechanism. o There are usually three stages involved in a radical reaction which are; ▪ initiation ▪ propagation ▪ termination o Initially when the weak bond is broken initiation of the reaction takes place with the formation of free radicals. o After that when the halogen is added to the hydrocarbon a radical is produced and finally, it gives alkyl halide. • Oxidation Reduction reactions (REDOX) o Electrons in an organic redox reaction often are transferred in the form of a hydride ion – a proton and two electrons. o Because they occur in conjunction with the transfer of a proton, these are commonly referred to as hydrogenation and dehydrogenation reactions: a hydride plus a proton adds up to a hydrogen (H2) molecule. o When a carbon atom in an organic compound loses a bond to hydrogen and gains a new bond to a heteroatom (or to another carbon), this means the compound has been dehydrogenated, or oxidized. o A very common biochemical example is the oxidation of an alcohol to a

Pharmaceutical Sciences Notes, PST Level 5 Semester 1, PST NTA Level 5, PST05106 Pharmaceutical Organic Chemistry

General Properties of Organic Compounds – PST05106 Pharmaceutical Organic Chemistry

NTA Level 5 • Semester 1 • PST05106 General Properties of Organic Compounds Pharmaceutical Organic Chemistry • Source Session/Topic 5 Full source-text version: all educational wording from the extracted learning source is retained; only presenter/tutor metadata and web-layout noise are removed, while formatting is improved for readability. Session 5: General Properties of Organic Compounds. Total Session Time: 120 minutes + 10 minutes home assignment. Prerequisites None Learning Tasks By the end of this session students are expected to be able to: • List physical properties of organic compounds • Explain the general properties of organic compounds Resources Needed: • Flip charts, marker pens, and masking tape. • Black/white board and chalk/whiteboard markers. SESSION OVERVIEW |Step |Time |Activity/ |Content | | | |Method | | |1 |05 minutes |Presentation |Introduction, Learning Tasks | |2 |25 minutes |Buzzing |Physical Properties of Organic | | | |Presentation |Compounds | |3 |60 minutes |Small group |General properties of Organic | | | |discussion |Compounds | | | |Presentation | | |4 |10 minutes |Presentation |Key Points | |5 | |Presentation |Evaluation | | |10 minutes | | | |6 |10 minutes |Presentation |Take Home Assignment | SESSION CONTENTS. STEP 1: Presentation of Session Title and Learning Tasks (5 minutes). READ or ASK students to read the learning tasks and clarify. ASK students if they have any questions before continuing. STEP 2: Physical Properties of Organic Compounds (25 minutes). |Activity: Buzzing (10minutes) | | | |ASK students to pair up and buzz on the following question for 5 | |minutes. | | | |What are the physical properties of organic compounds? | | | |ALLOW pairs to respond on the question. | | | |WRITE their response on the flip chart/board. | | | |CLARIFY and SUMMARIZE by using the content in the table 1 below. | The following are the physical properties of organic compounds; Melting Point. • It usually indicates the temperature in which a state of a compound changes from solid to liquid state. • There are few factors that affect the melting point such as: o Size of a molecule: ▪ Melting Point identifies the characteristics of an organic compound. ▪ Two different compounds consisting of a variant structural arrangement of atoms or possess different configurations will have difference of melting point. ▪ Two samples possessing same melting point will have same configurations. o Force of attraction between the molecules: ▪ Melting point of a compound is usually affected by the force of attraction between the molecules. ▪ The existence of hydrogen bonds in organic compounds will result to a higher melting point. Boiling Point: • Boiling Point varies depending on the surrounding environment. • A boiling point of a liquid is high at high pressure and has a lower boiling point when atmospheric pressure is low. • Factors that affect boiling point and they are stated below. o Polarity: Greater the polarity the higher the boiling point, that is, polarity determines the force of attraction between the molecules. Molecules are attracted by opposite charges in a polar compound. o Carbon-carbon chain: Boiling point decreases with the increase in the length of a carbon-carbon chain. o Strength of Intermolecular forces: Various effects such as Vander Waals dispersion hydrogen – bonding. Ionic bonding will affect the strength of intermolecular forces. Solubility • Organic compounds may dissolve in solvents like mixture, ethyl alcohol or white spirits. Flammability and vapour pressure • Flammability is a measure of how easy it would be for a substance to catch alight and burn. • When a substance is in the liquid or solid state there will be some molecules in the gas state. The weaker the intermolecular forces within a substance the higher the vapour pressure will be. • Compounds with higher vapour pressures have lower flash points and are therefore more flammable. STEP 3: General properties of organic compounds (60 minutes). |Activity: Small Group Discussion (20 minutes) | | | |DIVIDE students into small manageable groups. | | | |ASK students to discuss on the following question; | |What are the general properties of organic compounds? | | | |ALLOW students to discuss for 15 minutes. | | | |ALLOW few groups to present and the rest to add points have not been | |mentioned. | | | |CLARIFY and SUMMARIZE by using the contents below | • An understanding of the various types of noncovalent forces allows us to explain, on a molecular level, many observable physical properties of organic compounds. • Factors that influence physical properties of organic compound are: o Intermolecular forces o Type of function group o Chain length o Shape of the molecule • Intermolecular forces are forces that exist between molecules. They include; o Van der waals forces –dipole-dipole forces ▪ -induced dipole-induced dipole forces (London dispersion forces) o Hydrogen bonding. Flammability • Flammability is a measure of how easy it would be for a substance to catch alight and burn. The flash point of a substance is the lowest temperature that is likely to form a gaseous mixture you could set alight. • If a liquid has a low enough flash point it is considered flammable (able to be ignited easily) while those with higher flash points are considered nonflammable. • A substance that is classified as nonflammable can still be forced to burn, but it will not ignite easily. Vapor pressure • When a substance is in the liquid or solid state there will be some molecules in the gas state. These molecules have enough energy to overcome the intermolecular forces holding the majority of the substance in the liquid or solid phase • These gas molecules exert a pressure on the liquid or solid (and the container) and that pressure is the vapour pressure of that compound • The weaker the intermolecular forces within a substance the higher the vapour pressure will be • Compounds with higher vapour pressures have lower flash points and are therefore more flammable Solubility Solubility is a chemical property referring to

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